rs51888315 SNP Detail

Summary

• ID
  rs51888315
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:109223161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATT CCAGTAATTG AAAGTTGGAG
  M
  CAGGAAGGAC AGGGACTGAA AACCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132784371	ENSMUSSNP1963520	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss323845225	CHEV_11_109193649	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51888315					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:109223161 () rs orientation: forward

Symbol	Name	Function Class
Gm72366	predicted gene, 72366	883 bp upstream
Rr238867	regulatory region 238867	440 bp proximal
Rr369414	regulatory region 369414	695 bp downstream
Rr386660	regulatory region 386660	991 bp upstream