rs51894596 SNP Detail

Summary

• ID
  rs51894596
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133978722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATATTTTC TAATATTACT
  AGGAGGCAAA TATAACAGTC AACTCCCAGG TTTTCCAGAT ACTACATTTT TTTGCACTTT
  CTTCCACAGT AGTCCCTAAA CCTTAAGTGA TTTTTAGTTG TATCCATTGA AACTGGGGTC
  CACAACTCTG CATTTTGATT GGTCATGGTT TTCTATAATG GTCTCAATCT GTTGCAAAGA
  R
  TTTTCTTGAT TAGGAGACAA AACTATCTGT GAGTAACAGG ACATATGTTT ATTTTTGGTT
  GTGAGTCTAG CCTTTAACGG CTGAGCCACC TCTCCAGCCC AGGACAGATG TTTATTGATT
  ATTGTTGGTG ATTGTGTCCC AGGCCTGTAA CCTCAATTTG AACATATGTA GTATGTGCAG
  CATATCAGAT TTTACACTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147630470	ENSMUSSNP3437723	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320512713	CHEV_2_133962538	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51894596					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133978722 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12318	CpG island 12318	796 bp proximal