rs51898164 SNP Detail

Summary

• ID
  rs51898164
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33153122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACAGTGAT TGCATGCTAC
  ATCGACTCGT CGAGCCTGGA ACAGTCAGGA TCTCCCTGTT TAAAGCTGAG GCCTTTCCAC
  TGTCTGTAAG TGGAAATAAA CACGGGGGGG GGGGGAGGCA GTTTCCCCCT AGCATTAAAA
  TTCATGATCG TAAAAAATAA AATTCATGAT CATTTCAAAA GAACTACAAA CAAGGCTAAC
  Y
  GATGCTTTTT CCCGGTTCTG TCTTTATTCA TTCACTTTAA ATCTTCTTTG GAAGTACCTG
  AGGATTCGTT ATAAACTATA AACTATACTC ATGCCTCACA TATCCTCCCA TGCTATGAAA
  GCCAAACATA CACTGATCAC AACAGTGCCT CAGGTATGGC AAATAGAAAC ATGCATCCAC
  TCCATGCTTT CCACACGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137582139	ENSMUSSNP6538607	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51898164					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33153122 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	within coordinates
Rr464869	regulatory region 464869	400 bp distal
Rr464870	regulatory region 464870	105 bp distal