rs51899171 SNP Detail

Summary

• ID
  rs51899171
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:5536735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTAATAAC TGATATCCTC
  ACGACTATGA GCCTATCTAC TCCTAAGCAA GGTATAGCTT CCTGTGTTTA AGTCTTTCAG
  ATACTTTATG ATTTTCCTCA TAGGCCATCT TGTGATGCCT TATTTAGTGA CTGACATCAT
  ATTTTCCTTC CTATTTCATG ATCCTCTGCC CAGTTTTCTA TTCAATCACA TTTTCAAACT
  T
  GTTTTGTTTA ATGTACAAGC TTTGTATGAA ACTTTGGCAA CAACCAAATT TGCAAATTGT
  TTATAGTAAG TTACAGCCCT GCACACACAA CATTATGAGC CCTGCTCACA CAACATTGTG
  AGCCATGGAA CCTCCAAAGA TGCCACTGAT TTCCATTTCT GTTAGTGGTC TACTCCTGGA
  CACACAACCT TCTCTGGTGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss145954790	ENSMUSSNP4954388	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs51899171					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:5536735 () rs orientation: forward

Symbol	Name	Function Class
Tssr36375	transcription start site region 36375	86 bp upstream