rs51905323 SNP Detail

Summary

• ID
  rs51905323
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23294414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACC GGCCAGACAT ACCTGCTACT
  T
  TTACATGAGC CCTAAGGATT CTTCC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148843753	ENSMUSSNP3812253	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss322527944	CHEV_8_23914870	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51905323					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23294414 () rs orientation: forward

Symbol	Name	Function Class
1700041G16Rik	RIKEN cDNA 1700041G16 gene	1213 bp upstream
Ap3m2	adaptor-related protein complex 3, mu 2 subunit	within coordinates
Cpgi20156	CpG island 20156	909 bp proximal
Rr381798	regulatory region 381798	within coordinates
Rr400791	regulatory region 400791	1168 bp upstream
Tssr80611	transcription start site region 80611	506 bp upstream
Tssr80612	transcription start site region 80612	1198 bp downstream