rs51906704 SNP Detail

Summary

• ID
  rs51906704
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:60057157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAAGCACC ATCAGAGGCT
  TCTGGCATGA TCTTTTTCTG TGGGTATCTG GGATAGTTCT ATTTTGTTGC TGATAAAGCC
  CCCTGCCCTA ATTTGCTGGT GATAGTTAGG AGGTGTCAGA GTATAAACAC AATCAACTAG
  AGAAGGCAGA GTTATAAAGT CTGTGCTTGC CATTACTTTA AAAGTTTGAA AAGTAAAAGA
  M
  CTGATGAAAG TTAACCACAA AATAATGCAA TTGATGGGGA AATATGTCTG ACACTTACAG
  TCAATTCAAA AGGTTTAGGC TAAATATACA TGCATGGAAA GATTAATTCT ATTTTTCAAA
  GAAGAGTGCA TATGGCATCT AACTTATGAA ATAGATAAGC ATAATTTTCA CAGAAAAAGA
  TTTCAGATGT AATAGTCATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147991211	ENSMUSSNP2793055	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51906704					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:60057157 () rs orientation: forward

Symbol	Name	Function Class
Gm2682	predicted gene 2682	within coordinates
Gm41331	predicted gene, 41331	within coordinates
Rr390810	regulatory region 390810	1509 bp upstream
Tssr4605	transcription start site region 4605	1896 bp downstream
Tssr134460	transcription start site region 134460	1578 bp downstream
Tssr134461	transcription start site region 134461	1719 bp downstream
Tssr134462	transcription start site region 134462	1806 bp downstream
Tssr134463	transcription start site region 134463	1866 bp downstream
Tssr134464	transcription start site region 134464	1960 bp downstream