rs51908157 SNP Detail

Summary

• ID
  rs51908157
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84467971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGCGGCACG GAACGGACAG
  CGTCTGGGGT TGATAGAGGG CTGTGGCGGC CGGCTGGGCT GGGCTTTTAT GCAGCGGGCG
  TGAGCAGGGC CCTCCCCGGA ACTGTCCTCC CCGCTGGAAA GTAACAGGAA AGTGCCGGGG
  AAACAGACCC AGGGCGCGCC GCGCGCCCGC GTCTGGAACA AACGCAACAT TCCTCCCCCC
  S
  CCCCCCCGCG CGCGGCTCCG ACACCCGCCC CCGCGGGGAG CTGGGTGGTG TGGTTCAGGC
  GTCCTGGGAC GGGGACCAGG CACATCGGAC AGAGCTGGGT GGAGCTCCCA CCCGAACGAT
  GTCCTGGGCG ACCCTCGCCT TTCCCATCAG CAGGACTTGT CGGCTTCTTT TCCAAGAGAG
  AAACTGAAGT TCAGAGAAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145361135	ENSMUSSNP1419568	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51908157					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84467971 () rs orientation: forward

Symbol	Name	Function Class
Adgre5	adhesion G protein-coupled receptor E5	159 bp upstream
Cpgi20655	CpG island 20655	within coordinates
Gm46046	predicted gene, 46046	within coordinates
Rr368559	regulatory region 368559	1204 bp downstream
Rr666301	regulatory region 666301	82 bp distal
Rr666302	regulatory region 666302	within coordinates
Rr666303	regulatory region 666303	28 bp proximal
Rr666304	regulatory region 666304	874 bp proximal
Tssr2618	transcription start site region 2618	1229 bp upstream
Tssr2619	transcription start site region 2619	941 bp downstream
Tssr2620	transcription start site region 2620	45 bp downstream
Tssr2621	transcription start site region 2621	1213 bp upstream
Tssr78291	transcription start site region 78291	986 bp downstream
Tssr78292	transcription start site region 78292	964 bp downstream
Tssr78293	transcription start site region 78293	823 bp downstream
Tssr78294	transcription start site region 78294	768 bp downstream
Tssr78295	transcription start site region 78295	722 bp downstream
Tssr78296	transcription start site region 78296	703 bp downstream
Tssr78297	transcription start site region 78297	46 bp upstream
Tssr82049	transcription start site region 82049	1272 bp upstream
Tssr82050	transcription start site region 82050	1184 bp upstream
Tssr82051	transcription start site region 82051	910 bp upstream
Tssr82052	transcription start site region 82052	152 bp upstream