rs51910869 SNP Detail

Summary

• ID
  rs51910869
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86828029 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCCT CTAGAGGCGC TGGGCCCCTG
  T
  GGGAAGAGTG CAGCCGCCTC CCACG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135451261	ENSMUSSNP4180584	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs51910869					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86828029 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13328	CpG island 13328	within coordinates
Cpgi13329	CpG island 13329	711 bp proximal
Dclk2	doublecortin-like kinase 2	within coordinates
Rr77821	regulatory region 77821	within coordinates
Tssr33913	transcription start site region 33913	374 bp upstream
Tssr33914	transcription start site region 33914	332 bp upstream
Tssr33915	transcription start site region 33915	309 bp upstream
Tssr33916	transcription start site region 33916	187 bp upstream
Tssr33917	transcription start site region 33917	157 bp upstream
Tssr33918	transcription start site region 33918	108 bp downstream