rs51913432 SNP Detail

Summary

• ID
  rs51913432
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28685887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCCCCCAAG AGTCTGTTCC CCCAAACTCT GCGAAAAACC
  GCGGCCACAT TGCGGCCCGC GAACCTACCT GACGGATCGC CGGCTTAGAA AGAGGGACGG
  Y
  TCTCGCGAGA ACGGCTCATA TCCGGGTGGC GGAAGAAAAG AGGTGGGGAC AGCGGAAGTA
  GGTGGGTGGA AACCGGAAGC TCTTCTGAAA AGAGTTGGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137502237	ENSMUSSNP1120394	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51913432					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28685887 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4510	CpG island 4510	within coordinates
Gm53713	predicted gene, 53713	181 bp upstream
Rps7	ribosomal protein S7	within coordinates
Rr255850	regulatory region 255850	1514 bp proximal
Rr265285	regulatory region 265285	within coordinates
Rr369505	regulatory region 369505	within coordinates
Tssr116014	transcription start site region 116014	648 bp upstream
Tssr116015	transcription start site region 116015	51 bp upstream
Tssr116016	transcription start site region 116016	23 bp upstream
Tssr116017	transcription start site region 116017	1 bp upstream
Tssr116018	transcription start site region 116018	3 bp downstream
Tssr116019	transcription start site region 116019	26 bp downstream