rs51915549 SNP Detail

Summary

• ID
  rs51915549
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18997155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCACTCACA TACATTAAAT AAATAAATAA ATAAATAAAT
  CTTTAAAAAG AAATAGCACC TAGAGACTTT ACTTTGAACT GAGATGGCAC CAGGGTCTGG
  K
  ACATGGCAGG CAACCCTGTA CCACTGACCT GCTGCCTTAG CCGCCTGTGG ACTTTGCTTT
  GCCCAAATAC AGCTGTGGAG CCCAGAATGG CCCAGAACT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148471708	ENSMUSSNP1927721	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
ss322116779	CHEV_7_19848579	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51915549					SNP	G	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18997155 () rs orientation: forward

Symbol	Name	Function Class
Rr167144	regulatory region 167144	1645 bp proximal
Tssr70882	transcription start site region 70882	1171 bp upstream
Tssr70883	transcription start site region 70883	1239 bp downstream
Tssr70884	transcription start site region 70884	1580 bp downstream
Vasp	vasodilator-stimulated phosphoprotein	within coordinates