rs51915838 SNP Detail

Summary

• ID
  rs51915838
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:115349562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTTAAAG GTTTAAACAA
  AGACAGGAGA CTTTTGAACA TATGGGAAAA TGACACAATG GGTATCAGAA ATTTATCTTT
  ATTAATATTT TACAATTCTT TTTTTGAATT ATTGAAAATA GATGGCTTAG TGCATTATAT
  TCTGATTACG AGTTTCCATT CCCTAACACC TTCACAATCT TCTCTCATCT CTACTCTGTT
  W
  CTTAATAAAC TTAGAAAACA GAATCTAAAA ATAATACAAA AGAAAAGCAA ACAAATGGGA
  ATACACATAC ACACTCACTC ACACACAGAA AGAGACATAG TGAGAGACAG AGACAGAGAA
  CAAAGAACAG AGAGACAGAG AGTCAGAGAA AATGAGAGTC TAAAACCAAC GTATTTTACT
  TGTAATCTCA GTACACATTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss61730869	NES17649475	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51915838					SNP	A	A	A	A	A	T	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61730869	NES17649475	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:115349562 () rs orientation: forward

Symbol	Name	Function Class
Gm19331	predicted gene, 19331	904 bp upstream
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv1-62-1	immunoglobulin heavy variable 1-62-1	765 bp downstream