rs51916483 SNP Detail

Summary

• ID
  rs51916483
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108467117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGTGCCA CACCTGGCAT
  TGTTATGTGT CCATTATTTA ATCCTAGAAC ACCAAAATTA CCTAGAAAGT AAAACAAACA
  AGTATGCCTT AAGTAACGGC TAATTTAAAA TTTACCTCTT CCCTCAACTT TATCTTATTA
  GCAGACCCTA AGCAAAGCAC TTACCACATG ATTGTGAGGA CCTGAGTCAA AATCCCAGAA
  R
  TCACGTAAAA TATGGCTATT GTAATACAAA CCTGTGCTCT CAGTACTTGT AGGCTAAGTA
  GGCAGGACAA GTTCCAGAAG CTCACAGCTC AGCTAGCCAA GTGTACACAG CAGCAACCAC
  ACAATTACAA CACACCACAA ACACACTCAT ATAGTAAACA TGAGTCCAAA TATCACCCTG
  GTCCTACGCC TTCTATTCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135585623	ENSMUSSNP581323	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51916483					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108467117 () rs orientation: forward

Symbol	Name	Function Class
Rr583263	regulatory region 583263	1607 bp distal
Rr583264	regulatory region 583264	1019 bp distal
Rr583265	regulatory region 583265	1903 bp proximal
Tmem167b	transmembrane protein 167B	Intron