rs51922462 SNP Detail

Summary

• ID
  rs51922462
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:109223152 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAT ATCTGTATTC CAGTAATTGA
  R
  AGTTGGAGAC AGGAAGGACA GGGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss132784367	ENSMUSSNP7175041	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss323845224	CHEV_11_109193640	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51922462					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:109223152 () rs orientation: forward

Symbol	Name	Function Class
Gm72366	predicted gene, 72366	874 bp upstream
Rr238867	regulatory region 238867	449 bp proximal
Rr369414	regulatory region 369414	686 bp downstream
Rr386660	regulatory region 386660	1000 bp upstream