rs51923052 SNP Detail

Summary

• ID
  rs51923052
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:91601736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCTCTCTA GCATGTACCA
  GGGTTTCTGA GGTAACACCG TGGTATGTAT TTCCTTGTGC TAGAAGTGAT AAACACTTCC
  TTGAAGAAAA AGCCCAACTG TACAACAGAG CTGACATGTC CTAAGAGGAT CCAAGGCTGT
  GGCCAAAACC ATCCTGAGCA CTGTTGATCC AGTTTAAAAG AATGCAGGAT ACAAAGGGAA
  K
  CAAAAGAGGG AGTTGAAATC TGGAGGTGAC GCTTCCAGAA GAATGGTTGG GAAAGAGCTC
  AGGCCTGGGC TTGAGACCAC ACTCCTCTCT AGACCAGGTA CCTTCCTCAC CACAAGGAAC
  TTTACCTATC TTGCTTCTGG AAACAGGACC AGACTGGCAA ACCAGGAGAA ATAGATAGAG
  CGCTGTTGTA TCCTCTAATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52679066	NES15524184	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51923052					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52679066	NES15524184	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:91601736 () rs orientation: forward

Symbol	Name	Function Class
Rr277507	regulatory region 277507	936 bp distal
Rr277508	regulatory region 277508	within coordinates