rs51928137 SNP Detail

Summary

• ID
  rs51928137
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156938209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTGAAGCG GCCTAGGCCC CGTGTGCTGC CCTCCCTGTG
  CTAGGGTTTT TATGTTATCT GGCTTTTTAT GTTGGTGCTG GGGGCAGGTC CTCGTGCCCG
  M
  GTAACAGACA TTGTACCTAC AGAGCTGTCT CCAGAGCTCG TTCCCTCTCT CTTCAGTGGC
  CAGTTTGGGC TGTGGCTGGA CGGAGACCTG TACCATGGC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148091811	ENSMUSSNP2406763	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51928137					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156938209 () rs orientation: forward

Symbol	Name	Function Class
Rr568431	regulatory region 568431	612 bp distal
Rr568432	regulatory region 568432	1055 bp distal
Samhd1	SAM domain and HD domain, 1	1245 bp downstream
Tldc2	TBC/LysM associated domain containing 2	within coordinates