rs51935478 SNP Detail

Summary

• ID
  rs51935478
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185245696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTAATACAA TAATTTCAGA GCCAATTGAT AACAATAAAA
  GCTTTTTCCC AGTTATTCTA ACTTTGTGAA ATCATCACAT CAGCCTCCAT TCTCCTCGCT
  Y
  TCCTCTGAGA GGCTCCTTGT CTGTGCAACA ATTAGCTTTA CCTACCCTTT CCCTGTCCAA
  TCACAGGCAG GGACAGGGAA AATCCTACAA CATCTATAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146434895	ENSMUSSNP3906406	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss320176770	CHEV_1_187337378	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51935478					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185245696 () rs orientation: forward

Symbol	Name	Function Class
Rr425406	regulatory region 425406	1440 bp proximal