rs51939037 SNP Detail

Summary

• ID
  rs51939037
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8857692 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGATCCTC TTCTGGACTG
  CACAGACCAA CACACATACA TGTCCACATA TCCATATATA CATAACCACA TAGTCACATA
  ACTAAAAAAT AAAAATATTT TAAAAAATTG TGTCTAGAGA TACGTCCTAA TACAAATGAC
  CAATGTCTTG CTAACAAGGG TGTCAAGACA ATTAAAGCAG GAAAGAAAGG ATATTGCAAC
  K
  CGATGATGCC ACAAATCGGA TATCCACATG TGTATAAACA CAAATATACC TAATACCATG
  ACACTCCTGT TACAGACAAT GCAAACAAGA AACTGTGAAG ACAACCTGTA GAATCGGAGG
  AACAAGATAG GAATCATACA TCTGCCTTGG GACCGACATG CAGAACATAA AAAGTCATAA
  AAGGAATGAC AAAGGGGTAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146769157	ENSMUSSNP5480893	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
ss323246155	CHEV_10_8701746	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51939037					SNP	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8857692 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	909 bp proximal
Rr223852	regulatory region 223852	1386 bp proximal