rs51939681 SNP Detail

Summary

• ID
  rs51939681
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:53934816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCACCCCC ATTCTACCCG
  CTTAAGGGAA GTAGCCAAAA GAGGGTAGTG GAAGGACAGG GAGGAGAGAA AGTGACACAA
  TTCTACTTCA AATTAAAATA AAGTTTAAAA GAGAGGACTG TGTAGAGGGA GGAGTGTAGC
  TCAGTTGGTG GAGTGCAGGC CCAACATGAA CAAAACCTTT GGTTCAAACC CCAGCATGGA
  R
  CAAATCGGGT GTGGTAGCAC ATACCAGAAT GATAGGTCTT GGGAAATGGA AGCAGGAGGG
  AGCACCAGAA ATTCAGGCTT ATCTTTGGCT AAATACTAAT TGTGAGGTCA GCCTGGACTA
  TGTGAAACCT TATCTCAAAA ATCAATCATC AATCAATCAA TCAATCAAAC TTGGATTCCT
  GTTATATAAC AATGAGGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147113943	ENSMUSSNP4303465	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51939681					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:53934816 () rs orientation: forward

Symbol	Name	Function Class
Man1a	mannosidase 1, alpha	within coordinates
Rr215194	regulatory region 215194	785 bp proximal
Rr222944	regulatory region 222944	1381 bp distal
Rr227916	regulatory region 227916	within coordinates