rs51940025 SNP Detail

Summary

• ID
  rs51940025
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:20708337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTTGGG GTCCTGTTGG
  CTACATCATG TCTTGGCCAA TGGCATCACA GAGGGGTATG GCACTCAGGG AGACAGAACA
  TGATGACAGA GAAACGTCAG AGCAGGAAGG GCTCACACTT GTTTCTCTGT AAGTATTCTG
  TTGATAGTAG CCTAAAATAT TCTAGGTAAT GAGAGGGATT TCTTGAGTGT AAAAATATAA
  Y
  TATCCAGCTT TCTATTCATT ACACATGGGT TTTAATCTTG GTCTTAACAC ATTAGCCATG
  CAAATGTTGG TACTTACCAA ATTTTGACTC AATATTAGTT ATGTAAGGTT ACTTTTAAAC
  TCTTTGGATC TGCTATATTT TGGGGATTTG TTTGTTTGAG ACAAGGTTCT AGCCAATACT
  GGTTGGCCTT GAATTCATCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ
ss52173844	NES15231456	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ
rs51940025					SNP	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52173844	NES15231456	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:20708337 () rs orientation: forward

Symbol	Name	Function Class
Gm33510	predicted gene, 33510	within coordinates
Gm48651	predicted gene, 48651	1291 bp downstream