rs51941086 SNP Detail

Summary

• ID
  rs51941086
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70346670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGAGACAG GGTTTCTCTG
  TGTAGCCCTG GCTATTCTGG AACTCACTCT GTAGACCAGG CTGGCCTCAA ACTCAGAAAT
  CCGCCTGCCT CCGCCTCCCA AGTGCTGGGA TTAAAGGCGT GCATCACCAT GACCGGCTTA
  AGCCATCTTA TTCTTAAAAA AAAAAAAAAA AAAAAAAAAA GACTTTCTAG TTAACACAGT
  W
  ACTAGATAAG AAGAAAGCAT AGGTTCAAGT ATTTGTAAAG ACAAGGAACA TTTTATCATT
  ATTTTCCTGT ATCTGTTTGG AAACTCTAAT TAGTCTCCCT TCTGCAGTTG AATTTCTAAA
  GCTATACAGG TTAAGTATGT AGGTATGTTA GTGTGGGGGC GATTAGAAGG TAAATATATC
  CAGCAAGATA AAATGAAAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139680815	ENSMUSSNP7082954	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51941086					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70346670 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494842	regulatory region 494842			1789 bp distal
Rr494843	regulatory region 494843			461 bp proximal
Rr494844	regulatory region 494844			1750 bp proximal
Rr494845	regulatory region 494845			1844 bp proximal