rs51946551 SNP Detail

Summary

• ID
  rs51946551
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112295795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGA GCCACTCTGA AGGGAAGCAG
  Y
  ACCATCCGGC TGGGATCCTG TGGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss138716809	ENSMUSSNP5916228	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss324166902	CHEV_12_113567572	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51946551					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112295795 () rs orientation: forward

Symbol	Name	Function Class
Gm60261	predicted gene, 60261	within coordinates
Rr473423	regulatory region 473423	167 bp distal
Rr473424	regulatory region 473424	within coordinates