TCGTGTTGTG TGGCCTATTG CATGATTAAA TCAGGAGCAG TCAAAGACCT GCTAGAGAGG AAGGGGCCCC GAGAGGCCCT CTGGCAAAGG AAACTTCCTT TTTACCTTCA AGCTATCAAA AGAGACCTCT TAGGCGTAGC TTTAAAGGAA TAACAGATCG TGTGAAGGGA AAACTCCCTT TTAGGCAAGC TGGGGCATCA C TGTATTTCCA GGTGGGTGGT GCCGAGGCAT TCGGCTGGCC CTCTCAGGTT GGGGATGTGG AGAACTGAGA CCCTTGGCTT TGCACCCTAG TCTCAGATTT TGGCCCAGTC TTAGGTGTTG TTGATGCCTG GAAAGACCCT TTCTTTCGAA ATGATATTTG ACTTTTCACC AAACCATGTG AAGCGATTTG CTCATAGAGG C = C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
---|---|---|---|---|---|---|
ss147206219 | ENSMUSSNP6465177 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C |
SNP Consensus Information | ||||||
SNP | Consensus Type | A/J |
||||
rs51946655 | SNP | C |
Location: Chr2:109749859 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi12039 | CpG island 12039 | 653 bp distal | ||||||
Lgr4 | leucine-rich repeat-containing G protein-coupled receptor 4 | Intron | ||||||
Rr397176 | regulatory region 397176 | 1855 bp downstream | ||||||
Rr562509 | regulatory region 562509 | 1857 bp distal | ||||||
Rr562510 | regulatory region 562510 | within coordinates | ||||||
Rr562511 | regulatory region 562511 | 1730 bp distal | ||||||
Rr562512 | regulatory region 562512 | 1691 bp distal | ||||||
Rr562513 | regulatory region 562513 | 1303 bp distal | ||||||
Rr562514 | regulatory region 562514 | 507 bp proximal | ||||||
Tssr19307 | transcription start site region 19307 | 1922 bp downstream | ||||||
Tssr19308 | transcription start site region 19308 | 1876 bp downstream | ||||||
Tssr19309 | transcription start site region 19309 | 1858 bp downstream | ||||||
Tssr19310 | transcription start site region 19310 | 1828 bp downstream | ||||||
Tssr19311 | transcription start site region 19311 | 1778 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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