rs51947370 SNP Detail

Summary

• ID
  rs51947370
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:105074288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCCGGTAA AGCGAATGAT TAGAGGTCTT GGGGCCGAAA
  GGATCTCAAC CTATTCTCAA ACTTTAAATG GGTAAGAAGC CCGGCTCGCT GGCATGGAGC
  S
  GGGCGTGGAA TGCGAGTGCC TAGTGGGCCA CTTTTGGTAA GCAGAACGGG CGCTGCGGGA
  TGAACCGAAC GCCGGGTTAA GGCGCCCGAT GCCAGCGCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147491374	ENSMUSSNP6620611	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51947370					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:105074288 () rs orientation: forward

Symbol	Name	Function Class
Rr212535	regulatory region 212535	within coordinates
Tmtc2	transmembrane and tetratricopeptide repeat containing 2	within coordinates
Tssr95614	transcription start site region 95614	270 bp downstream
Tssr95615	transcription start site region 95615	61 bp upstream