rs51951362 SNP Detail

Summary

• ID
  rs51951362
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131709348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGGAGTC TTGCTATGTA
  GCCCAGGCTA GCTTTAGGTT TTTAGATTTA TGTCTATGGG TGTTTTGGCT GATGTATGTC
  TGTGTACCAC ATGCTTGCAG TACCCAGGAA AGCCAGAAGA AGGCACCTGA TCTCCTGGAA
  CTAGAGCTAC TGATGGTGTG AAAATCAAGC CCAAGGTGTC CTCTAGAAGA GCAGCTGATG
  Y
  AGTTAACCAC TGAACATCTC TATAAACCCC AGACTACCTC TGAACCCAAG ACCTGCCTCC
  CTTTTGTCAT CTAGTGCTGA GATTCTAGGC ATGTTATGCC AGGCCAAAAA TTGTTTCTCA
  GGAAAGTTTT AAAATACCAT AAATAGCCAG TCAGTGGTGG CGCATGCCTT TGATTCAGCA
  CTCGGGAGGC AGAGGCAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss147472336	ENSMUSSNP5116373	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T		C
ss321329610	CHEV_4_131537952	CHEVERUD	SCREENING_POP	f	SNP				T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs51951362					SNP	T	T	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131709348 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Rr600833	regulatory region 600833	71 bp distal
Rr600834	regulatory region 600834	61 bp proximal
Rr600835	regulatory region 600835	727 bp proximal
Tssr43622	transcription start site region 43622	689 bp downstream