rs51955584 SNP Detail

Summary

• ID
  rs51955584
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50582974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGG ATTCCAGCCC CAGCTGTCCT
  C
  GCAAGGCAGG AATGGGATGT ATATG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146533666	ENSMUSSNP4692385	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320289752	CHEV_2_50548482	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51955584					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50582974 () rs orientation: forward

Symbol	Name	Function Class
Rr556758	regulatory region 556758	1880 bp distal
Rr556759	regulatory region 556759	850 bp proximal
Rr556760	regulatory region 556760	1918 bp proximal