rs51960521 SNP Detail

Summary

• ID
  rs51960521
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6878432 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                        TGTGCAAAGC TCTGCTTACA GAACTAAGAC TTCGTGTGTA
  GGCAGCAGCT CAGGGGTGAG GTTAAAACAC TAAACTCCGC CAGGACTTTT GATAGTCACC
  R
  GAAGACTGTT TTGTTCTGAG GGGATTAAAA TTTTGTAAAC TTAAATTATA AGTTCAAAGG
  GCTGACTTAG TTCTTTCAGG GTAACGGTTT GAATCCTCCT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss60526278	NES16538660	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs51960521					SNP	A	A	A	A	A	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60526278	NES16538660	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6878432 () rs orientation: reverse

Symbol	Name	Function Class
Dynlt1c	dynein light chain Tctex-type 1C	1354 bp downstream
Tmem181c-ps	transmembrane protein 181C, pseudogene	within coordinates