rs51962066 SNP Detail

Summary

• ID
  rs51962066
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95974791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTATGCTGC TTTGAGGTCA
  TTTCTGCACC AAGTGCAGAA CCAAAAAGCC ATGGCCAGAA AATACCAGAT ATACCTAATC
  CAAGGAGCAT TCTAAAACAT AGCTGGCCTG TTGGCTGAAA AGAGATCAAA GCCATTAGAG
  ATAGCCACCT TAGAAAGGAG CTGCCCCAGG TCAGAGGAAA CAGGACACTG GGCACATTAT
  R
  CAGGACGGGG CCTTTGACTT GATCCAGGAA GGAAAAGGAA GCTACCAGAC ACTCCACACA
  ATCTGAACAT GGATTACTGT TGAGAGCACA GTACAGTTTC TGTAGCAAAC ACCCTCATAT
  TCACAATGGT CTTACAACGA TAGGAGAGCC CCTCCTTCTC CCAGTCACTG CTCAGAACCT
  GAAAAGAAAA CAAACAAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145641447	ENSMUSSNP5459042	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51962066					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95974791 () rs orientation: forward

Symbol	Name	Function Class
Cngb1	cyclic nucleotide gated channel beta 1	within coordinates
Rr368591	regulatory region 368591	557 bp downstream
Rr668198	regulatory region 668198	459 bp distal
Rr668199	regulatory region 668199	1674 bp proximal
Rr668200	regulatory region 668200	1879 bp proximal