rs51962225 SNP Detail

Summary

• ID
  rs51962225
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:94071803 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGATGGG AGGGGGAGGG
  GTGGGGAAGG GGAGGAGAGG GGAAGGGAGA GGGGGGAGAG AGGAAGAGAG AGAGAACTGC
  CCATGTAGTG GCCATGAGAT ACAAGGGACT GCCTGTGTTT GGGAACATTT TGGGGTCAAG
  AATGTGGAGC ATGAGACAAG TCAGATTTTT AGGAGGCTTT ATTTATTTGT TGTTGTTGTT
  R
  TTATTATTAT TATTTATTTA GACAGGGTCT TATGCAATGG AGGCCTTCTC AAACTCCCTA
  TGTGGTGGGA TCTGCCTCCT GAATGCTGGA ATCACAGGCA CAAACCACTA CGCTCTGCCT
  GGGTGGTGGT GGGAGGGCAT GTTGAGCCAC ACTAAGGGGC ATCTTATTGA CCTTGTAAAG
  ACCTGAACAT TTTATAAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss132635200	ENSMUSSNP2463783	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51962225					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:94071803 () rs orientation: forward

Symbol	Name	Function Class
Tssr110134	transcription start site region 110134	635 bp upstream