rs51963515 SNP Detail

Summary

• ID
  rs51963515
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118406367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTTGCAAG CAAAGACGTG TGGACAAGAG GGTACACTGT
  GTGACACTGG GACACACTAC AGCTTCTAAG AAGAGGTTTT TTTCTCTGCT GGGGGTGGGT
  T
  GAAAGGGTAT AGGCTGGGTA TGAGAGAGGA GGGGGACACG AGTGGGACTG GGGTGCATAA
  TGTGAAATTT ACAAAGAAAC TAATAAAACT TTAAAAAAA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149162372	ENSMUSSNP3409038	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51963515					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118406367 () rs orientation: forward

Symbol	Name	Function Class
Gm25076	predicted gene, 25076	1722 bp downstream
Gm73266	predicted gene, 73266	941 bp upstream
Rr618847	regulatory region 618847	1789 bp distal
Rr618848	regulatory region 618848	523 bp proximal
Rr618849	regulatory region 618849	892 bp proximal
Rr618850	regulatory region 618850	963 bp proximal