rs51967637 SNP Detail

Summary

• ID
  rs51967637
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17461728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCATCAGA TTTCACCTTG
  GACTTCACTG CCAGCGTGAC AGACATCACG CGGCTATCAC TGGTTGCAAG GGATTCTGGG
  AGAAAATTTT TCAAGACTGA GAAGGGAAGT CAGGGGAGGG AGATCTGCTT GGAAACAGGT
  GCTGGCTTAG CCAGGCAACA GTATTAGCCA CAGAGGTTTG GTTGGTCAGG AAAATACCAG
  Y
  AGAACTTCAT CATCCAATGT GTCACCCATG CCACAGACGC TAAGAAAGTC AAAGAGCAAT
  TAAAGTTGGC TGCAAAAGCT TGGAATTAGG GGGTGTCCTG CCATCTTTAG AAACTATCTG
  CTTCTATCAT TTTAAAGATG GGAAATACTT TTCCTAATAA ATGAGTCCAG GTAGAGTGTA
  AAAGTTATAC AACTTTTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133014942	ENSMUSSNP2064252	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51967637					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17461728 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17176	CpG island 17176	1586 bp proximal
Rr626799	regulatory region 626799	1581 bp proximal
Rr626800	regulatory region 626800	1745 bp proximal
Rr626801	regulatory region 626801	1788 bp proximal
Tssr55050	transcription start site region 55050	1703 bp upstream
Tssr55051	transcription start site region 55051	1826 bp upstream