rs51970734 SNP Detail

Summary

• ID
  rs51970734
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:118340617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCT TTAGAGCCTT TTGGGTTGCC
  R
  ATGTCATCAG CAAATTCATC TTTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	NOD/ShiLtJ
ss52610954	NES15502332	PERLEGEN	MM_PANEL2	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	NOD/ShiLtJ
rs51970734					SNP	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52610954	NES15502332	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:118340617 () rs orientation: forward

Symbol	Name	Function Class
Rr369642	regulatory region 369642	335 bp upstream
Rr387826	regulatory region 387826	930 bp downstream
Rr474222	regulatory region 474222	within coordinates
Tssr115561	transcription start site region 115561	117 bp downstream