rs51974393 SNP Detail

Summary

• ID
  rs51974393
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:96284741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGGAGAA GAAAAAGGGA
  GTTGTTTTCA ATGGTTCTCA GAACCCAACT CCGTGCACTT ACACAGTTAC TGTAGGCCTC
  TGTGTTTACA GCTAAGGCTG CAGCCTTTGA GACGGGCTCT ATGCACTTAG ACCCCATGGT
  GGCCTGCCCA CTTAGGGTGT CAGTAGTCTA GCTTAAAAAT CACACGGGCT GCTGGGGAAA
  M
  TGGCATCTTG ATCCTAGTTC TATTTCCCTT ATATGGTAGC TTGGTGACAG AGAGAACATT
  AGGGGCATAA CTTGGGGGTA CATCATAGCT GGAACTGAAC AGAAAACCCA ACATTTCCCT
  TGGGGAAAAC AAACAAACAA ACAAACAAAC AAACAAACAC TCTTTAAGAC AGTCTTTCAG
  GTTTTTGTTG TTGCTGTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	PWD/PhJ
ss60650957	NES16266228	PERLEGEN	MM_PANEL2	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	PWD/PhJ
rs51974393					SNP	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60650957	NES16266228	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96284741 () rs orientation: forward

Symbol	Name	Function Class
Ccdc113	coiled-coil domain containing 113	Intron
Prss54	serine protease 54	953 bp downstream