rs51976548 SNP Detail

Summary

• ID
  rs51976548
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:14725033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTCAGAA CTCCTGCTTC
  TCTGGGATCT CGTGACTCAT AGCCAGAGGA CATCAGATCC TGGGGAGTAT GACCAGCACA
  TACAAGTTTA CCTTGGTGTC ACTGAATCAA GTGGTGGATG TGGTTGACAC TTCACGAATT
  AAGGACAAGT TGTTTGGCAG ACCAGCGAGA TGAAGAACAT AGAGGATTTG GCTCCAAGAA
  R
  AGTCTCCGTG TGCAGCACAG GTTTTATGCT CTTATTTCCT CCAGGACTTA GGATGCTTTC
  TGGTTGGTGT GTGCATGTCC TTGTGAGTGT GTATGTATGA GTTTGTGTTT GTTCTCTCTC
  TCTCTCTCTC TCTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGACATGGAG
  GCAAAGACCA TTCAGATTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60541023	NES16560666	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51976548					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60541023	NES16560666	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:14725033 () rs orientation: forward

Symbol	Name	Function Class
Gm34916	predicted gene, 34916	within coordinates
Rr522535	regulatory region 522535	648 bp proximal