rs51977132 SNP Detail

Summary

• ID
  rs51977132
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:56962616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGCTGGGA TTAAAGGCAT
  ATGTCATTCC CCACCTCCCA AGGGATTCCA ACTTTTTTTT AAAAGATGTA TTTATTTATT
  ATATGTATGT GAGTACACTG TAGTTCTCTT CAGACACCGG AAGAAGGCAC CAGATCTCAT
  TACAGACCAC CACATGGTTG CTGGGAATTG AACTCAGGAC CTCTAGAAGA GCAGTCATTG
  M
  TCTTAACCGC TGAGCCATCT TTCTAGCCCC TCATTTACTC TTGTAAAATG TGGGAGTCAG
  GGCTGGAAAG ATGGCTCCAC CATGTAAGGT GGAGGAGAAA ACAATCCTAA AACACAAGTC
  CTTAGCAATC AGGTCCTTTC AAGGCTGCAT GTGCCCTATG GCAGGCCTGC CACCTCATCA
  CACCCCAGCA CTTACTAACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss136516055	ENSMUSSNP159527	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs51977132					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:56962616 () rs orientation: forward

Symbol	Name	Function Class
Gm10658	predicted gene 10658	1565 bp downstream
Ptpn9	protein tyrosine phosphatase, non-receptor type 9	within coordinates
Rr195851	regulatory region 195851	785 bp proximal
Rr212037	regulatory region 212037	869 bp proximal