rs51979324 SNP Detail

Summary

• ID
  rs51979324
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12329200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTCTAAG GACCTTCATG
  AGAGCCAGAG AAATTTGCCT TCCCTGGAAT GAGGCCCTGC TGACCCTGGG CTCGCCTGGG
  GCAGAGGGTT GGGCAGTGGG GACCCTAGAG ATGGCCCTCT CTGCAATAGG GGAGTGCCTA
  TAGGGTGCTG CCTGGGAGAG AGGTTCAGAA GATAAAATTA ACATGGCATA TGACTGGTTG
  R
  AAGTGGGCGT TTTGCAGGAG GGGTGAGGGA GCCTGATAGG GTTCTGGCCC TGACAGAGGA
  GCTTATGGGA TGAACACTGG AAAATGTACT GCCGCTGTGT GCTGAGGAGA AAGGTCTGAA
  GAGCAAGTGG TAGGGGCCAG AGGCAAGGGA TGCTACAGCC AGGCAGTACT CCAGCCTGGA
  TCCCAACAAC CTAGGCAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60572175	NES16031363	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51979324					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60572175	NES16031363	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12329200 () rs orientation: forward

Symbol	Name	Function Class
A230072I06Rik	RIKEN cDNA A230072I06 gene	within coordinates
Rr659697	regulatory region 659697	11 bp distal