rs51986370 SNP Detail

Summary

• ID
  rs51986370
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:67597958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGG TAGTTTCTAT TATTTTTCAC
  C
  CCACATGTAG GCTTGCTATG GCAAT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149266892	ENSMUSSNP4079243	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss324392126	CHEV_13_67550775	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51986370					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:67597958 () rs orientation: forward

Symbol	Name	Function Class
Gm38307	predicted gene, 38307	1819 bp upstream
Rr388629	regulatory region 388629	535 bp upstream
Tssr120253	transcription start site region 120253	1408 bp upstream
Tssr123102	transcription start site region 123102	1752 bp downstream
Zfp874a	zinc finger protein 874a	within coordinates