rs51992841 SNP Detail

Summary

• ID
  rs51992841
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18301617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTGTCCC TGAGACACAT
  AGACCCAGAT GAGCTCCCAG TCAGCCCTGT GTCTTCAGTA CTCTGGGAAG GTGGGATTTC
  CCAGCAGGAA GGTGACACAG GTGCCAGTGA AGTTTGGAAG GGACCAGTTG TGTGATGACT
  GGGAATGAAG ATAAACCCTT TATCACTAAT GAAACCAGTC AAGTTCCTAA CACAAGACAG
  R
  GGCCAGGGAG CAGCTGTGTG AGGAATTCAT CTTCTTGGTG TTGGGAAAGA TGTGACCTGT
  GTGTCCTGGA AAGGACTGTT GGCTTCTATC CTATGGACAG TTTGCAGGCA ACCTTCCAGC
  ATTATGGGTT GGTTTAACTG TGTTTGCTGA GCCAAACTGC TCTCTGGTCT TCCTGGGTCA
  CCAATACCCT TTGTCTGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148452297	ENSMUSSNP4282792	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51992841					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18301617 () rs orientation: forward

Symbol	Name	Function Class
Psg27	pregnancy-specific beta-1-glycoprotein 27	387 bp upstream
Tssr2095	transcription start site region 2095	131 bp upstream
Tssr70834	transcription start site region 70834	495 bp upstream
Tssr70835	transcription start site region 70835	394 bp upstream
Tssr70836	transcription start site region 70836	347 bp upstream
Tssr70837	transcription start site region 70837	297 bp upstream
Tssr70838	transcription start site region 70838	169 bp upstream