rs51993687 SNP Detail

Summary

• ID
  rs51993687
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32112596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTTGCTA TTTACCAGCA
  GTGAGATTCT CAGTGAGAGA GCTCAGTGCT TTCCGCGTCT GTGTAAATGA GAGGCAGATG
  TTAGCATTAT TATGATGGTT CACTAAGATG ATAGATTCCA GACAAGTGTC AGTACTACCA
  TCTTGAAACG TCAAATGCAT TGCTCCTTGT GTTAATTTGC CCTCTGTGTG GCAAAGTCCC
  Y
  GAGGGAGTAA ACTTATACTT AGGAAAGGTT AAATCCCTGA CGAGTTGATC CATTGTTTGG
  GTGCCTGCTG TGACATGAAT CGTGGTGGAA TCTATGGAAG AGGGAACTGC TCACTTGATA
  GTGGCCAGGA AGCAAAAGGG GCCAAGGTCT CAATGTCTCT ACCTGAAACT CACCTCTGGA
  GGGCTTTCTC CCACTTTGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	WSB/EiJ
ss60383502	NES15883160	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	WSB/EiJ
rs51993687					SNP	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60383502	NES15883160	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32112596 () rs orientation: forward

Symbol	Name	Function Class
Kcnmb2	potassium large conductance calcium-activated channel, subfamily M, beta member 2	within coordinates
Rr80380	regulatory region 80380	1206 bp proximal