rs51997691 SNP Detail

Summary

• ID
  rs51997691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126221075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATGTGTAT ATATATATGT
  ATACATACAC ACACACATAT ATATATATAT ATATGCATGT AACACATACA TGCATGTGAT
  ATTGAGTAAT AGAAAGACAG GCTGTGTGTG TAAAGAAGAT CAAGGATGGG TTAATGGAAA
  AAACTCAAAA ATAAAAGAAA AAATTCTGAA GTGATTTCTG TTTCTGTTCT GAGACTAAAG
  R
  GTTAGCCTTT TGCACACACC ACATGAACTA GACCCTCTTT CCTATGCCCT TCAGCTGTCC
  CATAAGAAGC TACCCCCTGA AAACCTGCAG ATACGAAACT CTAGAATATA CCTGCAGCTA
  CTCACAAGTG TGCAAAGGTG CAAACGAATA GTGTCTCCAG ACCCACCCAT CTGAAGAATC
  TGGGATAATT CAGATCTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61330267	NES16945048	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51997691					SNP	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61330267	NES16945048	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126221075 () rs orientation: forward

Symbol	Name	Function Class
Gm66003	predicted gene, 66003	within coordinates
Rr213438	regulatory region 213438	675 bp distal
Rr213439	regulatory region 213439	1326 bp proximal
Rr221931	regulatory region 221931	1338 bp proximal