rs52010843 SNP Detail

Summary

• ID
  rs52010843
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:88192008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CTGGGGACAC AGGCTGGAAA AGGATGCAGG TTCTGAACTA
  AGGTCTCCAG CGACCTTTCT TCTCATCAGA ATCTCAGATT ACCCCAAGGT GACCTAGACA
  C
  GAGTCCACTC TCACAGTCAC TTCCATAGTG ATTTCTGGAG CAGGCCACCA AGGCACACCA
  CGATAGCAGT TTGGTCTAGG AAAGTCAAGG GGGCTCACGA G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss144899251	ENSMUSSNP2571579	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52010843					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:88192008 () rs orientation: forward

Symbol	Name	Function Class
Hjurp	Holliday junction recognition protein	within coordinates
Mroh2a	maestro heat-like repeat family member 2A	1997 bp downstream
Rr35066	regulatory region 35066	within coordinates
Tssr12870	transcription start site region 12870	532 bp downstream