rs52016951 SNP Detail

Summary

• ID
  rs52016951
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:6410185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATATTGG GTTCTTTGAA
  ACTGATATGA GATATCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  TCTCACACAC ACACACACAC ACACACACAC ACGATACACA GAGATGACTC CAAAGAAAAG
  CGATGTAGCA AAGGGGTGTA GTCCTTGAAG TTTACGTTGA TGCTACAGGG CTGAGGATGT
  R
  CTCACACAGA GTACTTGTCT AGGTTGGACC AGGCCTTGGG CTGGGCCCTA GCAGCAACAC
  TGGCAACTGA CATGGGAAAA TGCAGTATGA AATATAAGTA ATTAGTGGGA ATTTTCCAGG
  ATTATTTCCT GAAAATGACA ATTCATTTTG AATTGTAGAG ATATGACAAT TTTCACTTAT
  TAGTGACTTC ATGAAAAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	WSB/EiJ
ss60967563	NES16157128	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	WSB/EiJ
rs52016951					SNP	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60967563	NES16157128	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:6410185 () rs orientation: forward

Symbol	Name	Function Class
Gm16307	predicted gene 16307	1802 bp upstream
Rr157505	regulatory region 157505	616 bp proximal