rs52018291 SNP Detail

Summary

• ID
  rs52018291
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23631800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGA GGTAGCTGCT TGCTGCTCCC
  M
  ACCCACCCCA TCCTTGCACT ACTAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148849885	ENSMUSSNP6490552	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52018291					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23631800 () rs orientation: forward

Symbol	Name	Function Class
Ank1	ankyrin 1, erythroid	within coordinates
D8Rck1	DNA segment, Chr 8, Rockefeller University 1	214 bp distal
Gm15816	predicted gene 15816	within coordinates
Mir486	microRNA 486	771 bp upstream
Mir3107	microRNA 3107	789 bp downstream
Rr186384	regulatory region 186384	1399 bp distal
Rr186385	regulatory region 186385	1200 bp proximal
Tssr76619	transcription start site region 76619	1743 bp downstream
Tssr76620	transcription start site region 76620	1657 bp downstream
Tssr76621	transcription start site region 76621	1616 bp downstream
Tssr76622	transcription start site region 76622	1195 bp upstream
Tssr76623	transcription start site region 76623	1306 bp upstream
Tssr76624	transcription start site region 76624	1464 bp upstream