rs52023387 SNP Detail

Summary

• ID
  rs52023387
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:116589999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGACTTC TTTACTCTCC
  CAGCTCCAAC CATGGTAGCT TTCATTCTCG TGCCTGACTT GGGGCCTTGT AATGTGTCAT
  GTTCTCTGCC TTGGACCTGG TTCCTTTGTT CATGCCACCT GTTGCCTGAT TCTCATTTAT
  TAGTGTTCTG CTCAAACACG ACTTGTTGAA GAGAACCTGT CCCTTTGGGT TAGGGCGGGT
  R
  CTTTTATATC CCATGTAGAG TGCTCTTAAG CCTTCTTGGG ATTGTTATGA TTATAAATAA
  ATATGTAAGT CTCTCTGAGG GCAGACATGT GTACTGCATA TGCCTGAGTG TGCACAGGGA
  TGCCAGAGGT CAACCTTGGG CATTGTGCCT CAGGAGCCAT CCACCTTGTA ATTTTGAGGC
  AGTGTCTCTC TTTAAACCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145742556	ENSMUSSNP6949526	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52023387					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:116589999 () rs orientation: forward

Symbol	Name	Function Class
Rr381374	regulatory region 381374	within coordinates