rs52026153 SNP Detail

Summary

• ID
  rs52026153
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73359060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGGGAACAG AGCCCTGTGT
  GAATAGCAGG CTCGGAGCTG GGGTAGAGAC TCAGGTGGAC AGTCTCCCAT GAGAATAACA
  AGCCCTTTGA GGAAGCTGGA GAGATGAGTA CCCCTGAGGT TGGTTGTGTC AGAGAGACAA
  GATGTCTGTT GTTGAGCATC GGGATTTGGA TGGGGCTGGG ATAGAGGGAA GAAGTCCAGC
  R
  TTGGCTGAGG AGCCTGGGTC TGTCTCTTCA CCTCTTCCCT GGTTGGGCTG GCTTGGAGGA
  TGTGGGAGCT TCTTCTCTCA GGTGCCTGCT GCTGAAGGCT GTGACTCTGC AGACAGTAAC
  CAGGCATTAC CTAAGTCTTG GTTCATGTTG TGAGCAGAGG GCAGGAAAAG GAGAAGGAAA
  TGAGGCTCTG CCACTTCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148110648	ENSMUSSNP6795676	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52026153					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73359060 () rs orientation: forward

Symbol	Name	Function Class
Gm63120	predicted gene, 63120	within coordinates
Rr504083	regulatory region 504083	713 bp distal
Tssr4621	transcription start site region 4621	611 bp upstream
Tssr4622	transcription start site region 4622	673 bp upstream
Tssr131529	transcription start site region 131529	623 bp upstream
Tssr134702	transcription start site region 134702	57 bp downstream
Tssr134703	transcription start site region 134703	97 bp downstream
Tssr134704	transcription start site region 134704	112 bp downstream
Tssr134705	transcription start site region 134705	124 bp downstream