rs52036557 SNP Detail

Summary

• ID
  rs52036557
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:76462879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATGGAGTC ACTGTGTGGC
  CGTACCGGTG GCCAGCTCCA GACATACTAT TTCGTGTCTA TTCCTATCCA TTTTTTCCTG
  CCATTTAATG TTCATGCAGA TCTCAGTTGT GCCTCTGCAT TCTGAATGAT GCTTTCAGAA
  TTTGCTGGTT GAGCTGGATG TCGGCTCAAA GGGAGGGGTG GAGGATGTCC TTAAAGTTTA
  M
  TGTGAAAGAT GGAGATATGG ATCTCTCAGT TGGGGGAGAT TTTAAGGAGA ATAATTTTGT
  AGATCTGATG ACAGAATAGG TTACATTTGT CAGTGCCCAA GTTTGTAACG CTTACCCAAA
  AACTCCAGGA GCTGCTGGAT ATTCAAGTCT GTATATCGGG GAATCTGGGA CTGTGCACAT
  AAATTGGGGA CTTGTCAGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147535290	ENSMUSSNP2134528	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
ss325700287	CHEV_18_76489462	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52036557					SNP	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:76462879 () rs orientation: forward

Symbol	Name	Function Class
Gm58741	predicted gene, 58741	within coordinates