rs52041335 SNP Detail

Summary

• ID
  rs52041335
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:68830112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGTATTTT CTGACTTTCT ACTTAATTTT ATCTACCATC
  CTGTGCATCC CACACACTTT ATTGTCCATT TTTCCTCATG CAAATTTCAA GACCTAACAT
  A
  TCTCCCCTTT GCAGCTTGTA TTCCTCCCCG ACTGTGTTCC TCAGTTGCTA CTGCCATCGC
  GGTCACGTCT GGTCTGGATG GTAGATTATA TCATTCTCT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss139660906	ENSMUSSNP770828	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52041335					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68830112 () rs orientation: forward

Symbol	Name	Function Class
Rr296117	regulatory region 296117	753 bp proximal
Tssr126359	transcription start site region 126359	1631 bp upstream