rs52043660 SNP Detail

Summary

• ID
  rs52043660
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:18134566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAT AATAAATGAT TGTGTTATGA
  T
  TTACAATTTA GAAACCTCAT ACATA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss134655360	ENSMUSSNP3518442	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52043660					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18134566 () rs orientation: forward

Symbol	Name	Function Class
Cyp7b1	cytochrome P450, family 7, subfamily b, polypeptide 1	Intron
Rr573878	regulatory region 573878	62 bp distal
Rr573879	regulatory region 573879	725 bp proximal