rs52061349 SNP Detail

Summary

• ID
  rs52061349
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:92030148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAA AAACATTGTT TTAACAGAGG
  R
  AAGGGTAAAC TGGTCTCTTC GATTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145568214	ENSMUSSNP6644714	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss322790902	CHEV_8_93827419	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52061349					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:92030148 () rs orientation: forward

Symbol	Name	Function Class
Rpgrip1l	Rpgrip1-like	within coordinates
Rr382458	regulatory region 382458	110 bp upstream
Rr406224	regulatory region 406224	1537 bp proximal
Rr407238	regulatory region 407238	1539 bp proximal
Rr667510	regulatory region 667510	1421 bp proximal