rs52063976 SNP Detail

Summary

• ID
  rs52063976
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23632815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATGCACAG CACTAACTGG GTTATTGCCC CTTCCCCCAC
  CCACCCCCAC CCCTGAACTC TCAGGGCCCA GCTCCAGAGC CGAGCAGCAG GCAGTCACTG
  R
  TTTTCTGCCT TCTGCAAAAA GCAGGGCCCG CGCAGCCTCC TGGGCCGGCA GAAGTGCTGA
  CTTGATGCTT CCCAACATAT CTCAGCACTT GGACAATAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148849900	ENSMUSSNP5675595	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52063976					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23632815 () rs orientation: forward

Symbol	Name	Function Class
Ank1	ankyrin 1, erythroid	within coordinates
D8Rck1	DNA segment, Chr 8, Rockefeller University 1	1229 bp distal
Gm15816	predicted gene 15816	within coordinates
Mir486	microRNA 486	117 bp downstream
Mir3107	microRNA 3107	137 bp upstream
Rr186385	regulatory region 186385	185 bp proximal
Tssr76622	transcription start site region 76622	180 bp upstream
Tssr76623	transcription start site region 76623	291 bp upstream
Tssr76624	transcription start site region 76624	449 bp upstream