rs52068826 SNP Detail

Summary

• ID
  rs52068826
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85418490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTTCAG ACGCCCCAGA
  AGAAGGTATT GGATGCTGTG AGCCATCATG TGGTTGTTGG GATTTGAATT CACAACCTTC
  AGAAGAGCAG TCGGAGCTCT TAACTGCTGA GCCATCTCTC CAGCCCCCTC TTTGAACTCT
  TTTTTTTTTT TTTTTTTTTT TTTTTAGATT TATTTATTTA TTATATGTAA GTACACTGTA
  K
  CTATCTTCAG ACACTCCAGA AGAAGCATCA GATTTCGTTA CGGATGGTTG TGAGCCACCA
  TGTGGTTGCT GGGATTTGAA CTCGGGACCT TCAGAAGAGC AGTCGGCGCT CTTAACCTCT
  GAGCTATCTC GCCAGCCCCT CTTTGAACTC TTAATTCCCT TGTTTGTGAA AGAATAGTAA
  TTTTACAGGG GTTATGCAGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322751360	CHEV_8_87215760	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52068826					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85418490 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20706	CpG island 20706	1812 bp distal
Trmt1	tRNA methyltransferase 1	within coordinates